Stem-loop xtr-mir-23b

Accession

MI0004913

Description

Xenopus tropicalis xtr-mir-23b precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

ccgguguggcuguuuggguuccuggcaugcugauuugugaguuaagauuaaaAUCACAUUGCCAGGGAUUACCacacaaccauguccu
..(((((((.(((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))).))))).)).

Structure

cc  -     c   u   --          -  c      gugagu 
  gg ugugg ugu ugg  guuccuggca ug ugauuu      u
  || ||||| ||| |||  |||||||||| || ||||||       
  cc guacc aca aCC  UAGGGACCGU AC ACUAaa      a
-u  u     a   c   AU          U  -      auuaga 

Annotation confidence Not enough data

Genome context

chr1: 123463474-123463561 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from xtr-mir-23b

Mature xtr-miR-23b

• Accession: MIMAT0003673
• Description: Xenopus tropicalis xtr-miR-23b mature miRNA
• Sequence: 53 - AUCACAUUGCCAGGGAUUACC - 73
• Evidence: not_experimental

References