Stem-loop xtr-mir-16b

Accession

MI0004910

Description

Xenopus tropicalis xtr-mir-16b precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

aauugcuccgcauUAGCAGCACGUAAAUAUUGGGUgauaugauauggagccccaguauuauuguacugcuuaaguguggcaagg
..(((((.(((...(((((.(((..((((((((((..(((...)))..).)))))))))..))).)))))...))).)))))..

Structure

aa     c   auU     C   UA         - ga   g 
  uugcu cgc   AGCAG ACG  AAUAUUGGG U  uau  
  ||||| |||   ||||| |||  ||||||||| |  ||| a
  aacgg gug   ucguc ugu  uuaugaccc g  gua  
gg     u   aau     a   ua         c ag   u 

Annotation confidence Not enough data

Genome context

chr5: 103362038-103362121 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-16b

Mature xtr-miR-16b

• Accession: MIMAT0003668
• Description: Xenopus tropicalis xtr-miR-16b mature miRNA
• Sequence: 14 - UAGCAGCACGUAAAUAUUGGGU - 35
• Evidence: not_experimental

References