miRBase entry: xtr-let-7e-2

Stem-loop xtr-let-7e-2


Accession
MI0004909
Description
Xenopus tropicalis xtr-let-7e-2 precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

gcccuuuggggUGAGGUAGUAGGUUGUUUAGUUguggguugcacccugacguuuggauaacuauacaaucuacugucuuuccugaaguggcug
(((((((((((.(((((((((((((((.(((((((((((...))))..........))))))).))))))))))))))))))))))).)))..

Structure
--   -        U               U       ----------    u 
  gcc cuuugggg GAGGUAGUAGGUUGU UAGUUgu          gggu  
  ||| |||||||| ||||||||||||||| |||||||          |||| g
  cgg gaaguccu uucugucaucuaaca aucaaua          ccca  
gu   u        -               u       gguuugcagu    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature xtr-let-7e

Accession MIMAT0003666
Description Xenopus tropicalis xtr-let-7e mature miRNA
Sequence 12 - UGAGGUAGUAGGUUGUUUAGUU - 33
Evidence experimental
Northern [1]

References

  1. PubMed ID: 18032731
    Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
    "Tang GQ, Maxwell ES"
    "Genome Res (2008) 18:104-112