Stem-loop sequence xtr-mir-24b

Accession

MI0004896 (change log)

Description

Xenopus tropicalis miR-24b stem-loop

Gene family

MIPF0000041; mir-24

Stem-loop

       c  a   a         uaa    u  uua 
5' cucc gu ccu cugggcuga   ucag gg   u
   |||| || ||| |||||||||   |||| ||   a
3' gagg ca gga gacuugacu   gguc cc   u
       a  -   c         --c    c  uuc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Xenopus_tropicalis_v9.1; GCA_000004195.3): chr3: 129999414-129999481 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from xtr-mir-24b

• xtr-mir-23a-1: chr3: 129998670-129998747 [+]
• xtr-mir-27a: chr3: 129999278-129999353 [+]
• xtr-mir-24b: chr3: 129999414-129999481 [+]

Database links

• miRBase Tracker:MI0004896

Mature sequence xtr-miR-24b

• Accession: MIMAT0003655
• Sequence: 45 - uggcucaguucagcaggacag - 65
• Evidence: by similarity; MI0000231
• Predicted targets:
  • TargetScanVert:xtr-miR-24b