Stem-loop sequence xtr-mir-301-2

Accession

MI0004877 (change log)

Description

Xenopus tropicalis miR-301-2 stem-loop

Gene family

MIPF0000034; mir-130

Stem-loop

   --   u    c       ---        a  ----g  a 
5'   gaa ugcu ugacagu   guugcacu cu     ug u
     ||| |||| |||||||   |||||||| ||     ||  
3'   cuu acga acuguua   uaacguga ga     ac c
   ua   u    a       uga        c  aguaa  u 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Xenopus_tropicalis_v9.1; GCA_000004195.3): chr1: 145402708-145402780 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from xtr-mir-301-2

• xtr-mir-130c: chr1: 145403553-145403623 [-]
• xtr-mir-301-2: chr1: 145402708-145402780 [-]
• xtr-mir-454: chr1: 145396839-145396941 [-]
• xtr-mir-130b: chr1: 145394707-145394782 [-]

Database links

• miRBase Tracker:MI0004877

Mature sequence xtr-miR-301

• Accession: MIMAT0003635
• Sequence: 44 - cagugcaauaguauugucaaagc - 66
• Evidence: by similarity; MI0002062
• Predicted targets:
  • TargetScanVert:xtr-miR-301