Stem-loop xtr-mir-130b

Accession

MI0004833

Description

Xenopus tropicalis xtr-mir-130b precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

ccgccugacacucuuucccuguugcacuacuguggcagugaauaaagCAGUGCAAUGAUGAAAGGGCAUcagucug
....((((..(((((((..(((((((((.((..............)).)))))))))..)))))))..))))....

Structure

ccgc    ca       cc         a  guggca 
    cuga  cucuuuc  uguugcacu cu      g
    ||||  |||||||  ||||||||| ||       
    gacU  GGGAAAG  GUAACGUGA ga      u
gucu    AC       UA         C  aauaag 

Annotation confidence Not enough data

Genome context

chr1: 145394707-145394782 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from xtr-mir-130b

Mature xtr-miR-130b

• Accession: MIMAT0003593
• Description: Xenopus tropicalis xtr-miR-130b mature miRNA
• Sequence: 48 - CAGUGCAAUGAUGAAAGGGCAU - 69
• Evidence: not_experimental

References