Stem-loop sequence xtr-mir-16a

AccessionMI0004802 (change log)
DescriptionXenopus tropicalis miR-16a stem-loop
Gene family MIPF0000006; mir-15
Stem-loop 
   --      ag c            -  a        ug  a 
5'   gccagc  u cuuuagcagcac gu aauauugg  uu a
     ||||||  | |||||||||||| || ||||||||  || a
3'   cgguug  a gagaucgucgug ca uuauaacc  gg a
   uc      ga u            u  a        cu  u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Xenopus_tropicalis_v9.1; GCA_000004195.3) Overlapping transcripts
chr2: 146575390-146575471 [-]
intergenic
Clustered miRNAs
< 10kb from xtr-mir-16a
xtr-mir-15achr2: 146575525-146575607 [-]
xtr-mir-16achr2: 146575390-146575471 [-]
Database links

Mature sequence xtr-miR-16a

Accession MIMAT0003563
Sequence

14 -  

uagcagcacguaaauauuggug

 - 35

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Evidence experimental; Northern [1]
Predicted targets

References

1
PMID:18032731 "Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation" Tang GQ, Maxwell ES Genome Res. 18:104-112(2008).