Stem-loop sequence xtr-mir-9b

Accession

MI0004795 (change log)

Description

Xenopus tropicalis miR-9b stem-loop

Gene family

MIPF0000014; mir-9

Literature search

1 open access papers mention xtr-mir-9b
(1 sentences)

Stem-loop

   --    c  uc       ac      g     g   a 
5'   guuu ug  uuugguu  cuagcu uauga uau a
     |||| ||  |||||||  |||||| ||||| ||| c
3'   caaa au  aagccaa  gaucga auacu gua u
   ac    u  gc       ca      a     -   a 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Xenopus_tropicalis_v9.1; GCA_000004195.3): chr1: 102034631-102034704 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0004795

Mature sequence xtr-miR-9b-5p

• Accession: MIMAT0003555
• Previous IDs: xtr-miR-9b
• Sequence: 8 - ucuuugguuaccuagcuguauga - 30
• Evidence: by similarity; MI0001883
• Predicted targets:
  • TargetScanVert:xtr-miR-9b-5p

Mature sequence xtr-miR-9b-3p

• Accession: MIMAT0003556
• Previous IDs: xtr-miR-9b*
• Sequence: 46 - uaaagcuagacaaccgaacgu - 66
• Evidence: by similarity; MI0001883
• Predicted targets:
  • TargetScanVert:xtr-miR-9b-3p