Stem-loop sequence dre-mir-738

AccessionMI0004784 (change log)
DescriptionDanio rerio miR-738 stem-loop
Gene family MIPF0001514; mir-738
Literature search

1 open access papers mention dre-mir-738
(1 sentences)

      ac   -          ----  cu       a       cu      g 
5' gcu  ggc ccgcgucggg    ac  cucgucu gcgacuu  ccccuc g
   |||  ||| ||||||||||    ||  ||||||| |||||||  ||||||  
3' cgg  ccg ggcgcggccc    ug  gagcggg cgcugga  ggggag g
      cu   u          cucc  -u       g       ug      g 
Get sequence
Deep sequencing
2740 reads, 1.3e+05 reads per million, 16 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (GRCz11; GCA_000002035.4) Overlapping transcripts
chr4: 68564061-68564158 [-]
ENSDART00000130501 ; BX548011.3-201; intron 2
Database links

Mature sequence dre-miR-738

Accession MIMAT0003769

1 - 


 - 23

Get sequence
Deep sequencing2199 reads, 16 experiments
Evidence experimental; cloned [1], Northern [1]
Database links
Predicted targets


PMID:16698962 "Cloning and expression of new microRNAs from zebrafish" Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH Nucleic Acids Res. 34:2558-2569(2006).