miRBase entry: bta-mir-101-2

Stem-loop bta-mir-101-2


Accession
MI0004735
Description
Bos taurus bta-mir-101-2 precursor miRNA
Gene family
MIPF0000046; mir-101

Literature search
14 open access papers mention bta-mir-101-2
(34 sentences)

Sequence

112108 reads, 1087 reads per million, 76 experiments
acuguccuuuuucgguuaucaugguaccgaugcuguauaucugaaaggUACAGUACUGUGAUAACUGAAgaaugguggu
((((.((((((((((((((((((((((.(.((((............))))).)))))))))))))))))))).))))))

Structure
    u  -                    c a    guaua 
acug cc uuuuucgguuaucaugguac g ugcu     u
|||| || |||||||||||||||||||| | ||||      
uggu gg aagAAGUCAAUAGUGUCAUG C AUgg     c
    -  u                    A -    aaagu 


Annotation confidence Not enough data
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Genome context
chr8: 40067392-40067470 [-]

Database links

Mature bta-miR-101

Accession MIMAT0003520
Description Bos taurus bta-miR-101 mature miRNA
Sequence 49 - UACAGUACUGUGAUAACUGAA - 69
Evidence experimental
cloned [2]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988