miRBase entry: bta-mir-26a-2

Stem-loop bta-mir-26a-2


Accession
MI0004731
Description
Bos taurus bta-mir-26a-2 precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
42 open access papers mention bta-mir-26a-2
(125 sentences)

Sequence

1915080 reads, 21998 reads per million, 78 experiments
ggcuguggcuggaUUCAAGUAAUCCAGGAUAGGCUguuuccaucugugaggccuauucuugauuacuuguuucuggaggcagcu
((((((..(((((..(((((((((.((((((((((..............)))))))))).)))))))))..)))))..))))))

Structure
      gg     UU         C          guuucc 
ggcugu  cugga  CAAGUAAUC AGGAUAGGCU      a
||||||  |||||  ||||||||| ||||||||||       
ucgacg  ggucu  guucauuag ucuuauccgg      u
      ga     uu         u          aguguc 


Annotation confidence High
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Genome context
chr5: 56156321-56156404 [+]

Database links

Mature bta-miR-26a

Accession MIMAT0003516
Description Bos taurus bta-miR-26a mature miRNA
Sequence 14 - UUCAAGUAAUCCAGGAUAGGCU - 35
Evidence experimental
cloned [2-3]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988

  3. PubMed ID: 19267191
    Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
    "Long JE, Chen HX"
    "Biochem Genet (2009) 47:329-343