Stem-loop sequence mmu-mir-711

Accession

MI0004695 (change log)

Symbol

MGI:Mir711

Description

Mus musculus miR-711 stem-loop

Gene family

MIPF0000748; mir-711

Literature search

14 open access papers mention mmu-mir-711
(160 sentences)

Stem-loop

      g      -    uga          a    g      gc 
5' cau uuccua acuu   aucucuucuu gggu cuucag  a
   ||| |||||| ||||   |||||||||| |||| ||||||   
3' gua aggggu ugaa   uagagagggg ccca gggguc  a
      g      c    -ug          -    -      ga 

Deep sequencing

8 reads, 0 reads per million, 7 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr9: 108969922-108970003 [+]
• Overlapping transcripts:

  sense

  OTTMUST00000050582 ; Col7a1-002; intron 1

  OTTMUST00000050581 ; Col7a1-001; intron 62

  ENSMUST00000126780 ; Col7a1-002; intron 1

  ENSMUST00000026740 ; Col7a1-201; intron 61

  ENSMUST00000112070 ; Col7a1-001; intron 62

Database links

• EntrezGene:Mir711
• MGI:Mir711
• miRBase Tracker:MI0004695

Mature sequence mmu-miR-711

• Accession: MIMAT0003501
• Sequence: 49 - gggacccggggagagauguaag - 70
• Deep sequencing: 4 reads, 4 experiments
• Evidence: experimental; MPSS [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-711
  • miRDB:mmu-miR-711
  • microrna.org:mmu-miR-711

References

1. PMID:16582102 "The expression profile of microRNAs in mouse embryos" Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I Nucleic Acids Res. 34:1765-1771(2006).