miRBase entry: mmu-mir-682

Stem-loop mmu-mir-682


Accession
MI0004644
Symbol
MGI: Mir682
Description
Mus musculus mmu-mir-682 precursor miRNA

Literature search
5 open access papers mention mmu-mir-682
(89 sentences)

Sequence

68 reads, 44 reads per million, 23 experiments
gccgucggcaucuggcacugugguuccugcaugaaaacaguggccggcggggccuggaccuacaacaccaccuCUGCAGUCACAGUGAAGUCUGcc
......((((.((..((((((((...(((((.((.......((((.....))))(((..........)))..))))))))))))))).))..))))

Structure
gccguc    -u  gg        uuc     u  -----------aaacagu    g 
      ggca  cu  cacugugg   cugca ga                  ggcc g
      ||||  ||  ||||||||   ||||| ||                  |||| c
      ccGU  GA  GUGACACU   GACGU Cu                  ccgg g
------    CU  -A        ---     -  ccaccacaacauccaggu    g 


Annotation confidence Not enough data
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Genome context
chr13: 75645046-75645141 [+]

Database links

Mature mmu-miR-682

Accession MIMAT0003459
Description Mus musculus mmu-miR-682 mature miRNA
Sequence 74 - CUGCAGUCACAGUGAAGUCUG - 94
Evidence experimental
MPSS [1], Illumina [2]

References

  1. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  2. PubMed ID: 16582102
    The expression profile of microRNAs in mouse embryos
    "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
    "Nucleic Acids Res (2006) 34:1765-1771