Stem-loop mmu-mir-680-1

Accession

MI0004640

Symbol

MGI: Mir680-1

Description

Mus musculus mmu-mir-680-1 precursor miRNA

Gene family

MIPF0000338; mir-680

Literature search

7 open access papers mention mmu-mir-680-1
(11 sentences)

Sequence

4 reads, 134 reads per million, 4 experiments

agaaguGGGCAUCUGCUGACAUGGGGGccgaagucaggcgccaggaagcgggcacuuugcaucuuaucuccggaacaucgauccucuugacagccuugggugucaggcu
...(((.(((((((((((.((.(((((.(((.(((.((.(..((((.((((.....)))).))))..).)).).)).))).))))).)).))))...)))))))..)))

Structure

aga   -G       ---    A  U     c   a  - a  c cc    a    g 
   agu  GGCAUCU   GCUG CA GGGGG cga gu c gg g  agga gcgg c
   |||  |||||||   |||| || ||||| ||| || | || |  |||| |||| a
   ucg  cuguggg   cgac gu cuccu gcu ca g cc c  uucu cguu c
---   ga       uuc    a  u     a   a  a g  u ua    a    u 

Annotation confidence Not enough data

Genome context

chr6: 129691535-129691643 [+]

Mature mmu-miR-680

• Accession: MIMAT0003457
• Description: Mus musculus mmu-miR-680 mature miRNA
• Sequence: 7 - GGGCAUCUGCUGACAUGGGGG - 27
• Evidence: experimental ; MPSS [1]

References

1. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771