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miRBase |
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Stem-loop sequence rno-mir-505 |
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Accession | MI0003720 (change log) | |||||
Description | Rattus norvegicus miR-505 stem-loop | |||||
Gene family | MIPF0000217; mir-505 | |||||
Literature search |
4 open access papers mention rno-mir-505 | |||||
Stem-loop |
u g a -u g 5' ag gggggagccag aagu uugauguu cu c || ||||||||||| |||| |||||||| || 3' uc cuccuuugguc uuca aacugcga gg c u g c uu a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence rno-miR-505-5p |
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Accession | MIMAT0017226 |
Previous IDs | rno-miR-505* |
Sequence |
6 - gggagccaggaaguauugauguu - 28 |
Deep sequencing | 735 reads, 236 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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Mature sequence rno-miR-505-3p |
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Accession | MIMAT0003380 |
Previous IDs | rno-miR-505 |
Sequence |
43 - gucaacacuugcugguuucc - 62 |
Deep sequencing | 30736 reads, 490 experiments |
Evidence | experimental; cloned [1], Northern [1], SOLiD [2] |
Predicted targets |
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References |
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1 | |
2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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