miRBase entry: gga-mir-490

Stem-loop gga-mir-490


Accession
MI0003709
Description
Gallus gallus gga-mir-490 precursor miRNA
Gene family
MIPF0000229; mir-490

Literature search
2 open access papers mention gga-mir-490
(4 sentences)

Sequence

3364 reads, 52 reads per million, 5 experiments
aaguucaugguucgacaCCAUGGAUCUCCAGGUGGGUcaagauuauagagauacacCAACCUGGAGGACUCCAUGCUGuugagcuguucacaa
..((..(((((((((((.(((((((((((((((.(((....(((.....)))..))).)))))))))..)))))).)))))))))))..))..

Structure
aa  uc           C      --         G   caag   a 
  gu  augguucgaca CAUGGA  UCUCCAGGU GGU    auu u
  ||  ||||||||||| ||||||  ||||||||| |||    ||| a
  ca  ugucgaguuGU GUACCU  GGAGGUCCA Cca    uag g
aa  cu           C      CA         A   --ca   a 


Annotation confidence High
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Genome context
chr1: 57923979-57924071 [-]

Database links

Mature gga-miR-490-3p

Accession MIMAT0003366
Description Gallus gallus gga-miR-490-3p mature miRNA
Sequence 57 - CAACCUGGAGGACUCCAUGCUG - 78
Evidence experimental
Illumina [1]

Mature gga-miR-490-5p

Accession MIMAT0026633
Description Gallus gallus gga-miR-490-5p mature miRNA
Sequence 18 - CCAUGGAUCUCCAGGUGGGU - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45