Stem-loop gga-mir-9-1

Accession

MI0003694

Description

Gallus gallus gga-mir-9-1 precursor miRNA

Gene family

MIPF0000014; mir-9

Literature search

19 open access papers mention gga-mir-9-1
(359 sentences)

Sequence

5224539 reads, 55220 reads per million, 5 experiments

uuggguugguuuuucUCUUUGGUUAUCUAGCUGUAUGAguguaugugauaucaUAAAGCUAGAGAACCGAAUGUaaaaacccgcucgc
.(((((.(((((((...(((((((.(((((((.(((((............))))).))))))).)))))))...))))))).))))).

Structure

u     u       cUC       A       G     gugua 
 ugggu gguuuuu   UUUGGUU UCUAGCU UAUGA     u
 ||||| |||||||   ||||||| ||||||| |||||      
 gcucg ccaaaaa   AAGCCAA AGAUCGA AUacu     g
c     c       UGU       G       A     auagu 

Annotation confidence High

Genome context

chr28: 3623171-3623258 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from gga-mir-9-1

Mature gga-miR-9-5p

• Accession: MIMAT0001195
• Description: Gallus gallus gga-miR-9-5p mature miRNA
• Sequence: 16 - UCUUUGGUUAUCUAGCUGUAUGA - 38
• Evidence: not_experimental

Mature gga-miR-9-3p

• Accession: MIMAT0003350
• Description: Gallus gallus gga-miR-9-3p mature miRNA
• Sequence: 54 - UAAAGCUAGAGAACCGAAUGU - 74
• Evidence: not_experimental

References