miRBase entry: dre-mir-31

Stem-loop dre-mir-31


Accession
MI0003691
Description
Danio rerio dre-mir-31 precursor miRNA
Gene family
MIPF0000064; mir-31

Literature search
8 open access papers mention dre-mir-31
(29 sentences)

Sequence

4122 reads, 329 reads per million, 11 experiments
gaagagaUGGCAAGAUGUUGGCAUAGCUGuuaauguuuaugggccugcuaugccuccauauugccauuucug
..(((((((((((.(((..((((((((.(((..........)))..))))))))..))).))))))))))).

Structure
ga           G   UU        -U   aaug 
  agagaUGGCAA AUG  GGCAUAGC  Guu    u
  ||||||||||| |||  ||||||||  |||     
  ucuuuaccguu uac  ccguaucg  cgg    u
-g           a   cu        uc   guau 


Annotation confidence High
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Genome context
chr7: 73263751-73263822 [-]

Database links

Mature dre-miR-31

Accession MIMAT0003347
Description Danio rerio dre-miR-31 mature miRNA
Sequence 8 - UGGCAAGAUGUUGGCAUAGCUG - 29
Evidence experimental
array [1], in-situ [1]
Database links
Predicted targets

References

  1. PubMed ID: 15919954
    MicroRNA expression in zebrafish embryonic development
    "Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH"
    "Science (2005) 309:310-311