miRBase entry: hsa-mir-616

Stem-loop hsa-mir-616


Accession
MI0003629
Symbol
HGNC: MIR616
Description
Homo sapiens hsa-mir-616 precursor miRNA
Gene family
MIPF0000507; mir-616

Literature search
6 open access papers mention hsa-mir-616
(7 sentences)

Sequence

802 reads, 42 reads per million, 104 experiments
uuagguaauuccuccACUCAAAACCCUUCAGUGACUUccaugacaugaaauaggaAGUCAUUGGAGGGUUUGAGCAGaggaaugaccuguuuuaaaa
.(((((.(((((((..((((((.((((((((((((((((((........)).))))))))))))))))))))))..))))))).)))))........

Structure
-------u     a       cA      A                -  gac 
        uaggu auuccuc  CUCAAA CCCUUCAGUGACUUcc au   a
        ||||| |||||||  |||||| |||||||||||||||| ||    
        gucca uaaggaG  GAGUUU GGGAGGUUACUGAagg ua   u
aaaauuuu     g       AC      -                a  aag 


Annotation confidence High
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Genome context
chr12: 57519163-57519259 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-616
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-616 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-616-5p

Accession MIMAT0003284
Description Homo sapiens hsa-miR-616-5p mature miRNA
Sequence 16 - ACUCAAAACCCUUCAGUGACUU - 37
Evidence experimental
SAGE [1]
Database links
Predicted targets

Mature hsa-miR-616-3p

Accession MIMAT0004805
Description Homo sapiens hsa-miR-616-3p mature miRNA
Sequence 56 - AGUCAUUGGAGGGUUUGAGCAG - 77
Evidence experimental
cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 16505370
    The colorectal microRNAome
    "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
    "Proc Natl Acad Sci U S A (2006) 103:3687-3692