miRBase entry: hsa-mir-561

Stem-loop hsa-mir-561


Accession
MI0003567
Symbol
HGNC: MIR561
Description
Homo sapiens hsa-mir-561 precursor miRNA
Gene family
MIPF0000623; mir-561

Literature search
5 open access papers mention hsa-mir-561
(26 sentences)

Sequence

1631 reads, 69 reads per million, 92 experiments
cuucauccaccaguccuccaggaacAUCAAGGAUCUUAAACUUUGCCagagcuacaaaggCAAAGUUUAAGAUCCUUGAAGUuccugggggaaccau
.............((((((((((((.(((((((((((((((((((((...........))))))))))))))))))))).)))))))))))).....

Structure
cuucauccaccag            A                     agag 
             uccuccaggaac UCAAGGAUCUUAAACUUUGCC    c
             |||||||||||| |||||||||||||||||||||    u
             aggggguccuUG AGUUCCUAGAAUUUGAAACgg    a
--------uacca            A                     aaac 


Annotation confidence High
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Genome context
chr2: 188297492-188297588 [+]

Disease association
hsa-mir-561 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-561-3p

Accession MIMAT0003225
Description Homo sapiens hsa-miR-561-3p mature miRNA
Sequence 61 - CAAAGUUUAAGAUCCUUGAAGU - 82
Evidence experimental
SAGE [1], cloned [2]

Mature hsa-miR-561-5p

Accession MIMAT0022706
Description Homo sapiens hsa-miR-561-5p mature miRNA
Sequence 26 - AUCAAGGAUCUUAAACUUUGCC - 47
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 16505370
    The colorectal microRNAome
    "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
    "Proc Natl Acad Sci U S A (2006) 103:3687-3692