Stem-loop mmu-mir-367

Accession

MI0003531

Symbol

MGI: Mir367

Description

Mus musculus mmu-mir-367 precursor miRNA

Gene family

MIPF0000162; mir-367

Literature search

24 open access papers mention mmu-mir-367
(87 sentences)

Sequence

708 reads, 52 reads per million, 16 experiments

aggccgucACUGUUGCUAACAUGCAACUCuguugaauagaaauuggAAUUGCACUUUAGCAAUGGUGAuggaccu
(((((((((((((((((((..(((((.((((.(........).)))).)))))..)))))))))))))))).)))

Structure

   -                CA     C    u gaa 
agg ccgucACUGUUGCUAA  UGCAA UCug u   u
||| ||||||||||||||||  ||||| |||| |    
ucc gguAGUGGUAACGAUU  ACGUU Aggu a   a
   a                UC     A    u aag 

Annotation confidence Not enough data

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].

Genome context

chr3: 127545733-127545807 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from mmu-mir-367

Mature mmu-miR-367-5p

• Accession: MIMAT0017214
• Description: Mus musculus mmu-miR-367-5p mature miRNA
• Sequence: 9 - ACUGUUGCUAACAUGCAACUC - 29
• Evidence: experimental ; Illumina [4]

Mature mmu-miR-367-3p

• Accession: MIMAT0003181
• Description: Mus musculus mmu-miR-367-3p mature miRNA
• Sequence: 47 - AAUUGCACUUUAGCAAUGGUGA - 68
• Evidence: experimental ; cloned [1,3], MPSS [2], Illumina [4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771


4. PubMed ID: 16274478
   Identification of clustered microRNAs using an ab initio prediction method
   Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M
   BMC Bioinformatics (2005) 6:267