miRBase entry: rno-mir-361

Stem-loop rno-mir-361


Accession
MI0003481
Description
Rattus norvegicus rno-mir-361 precursor miRNA
Gene family
MIPF0000172; mir-361

Literature search
8 open access papers mention rno-mir-361
(13 sentences)

Sequence

111002 reads, 130 reads per million, 492 experiments
gaagcUUAUCAGAAUCUCCAGGGGUACuuauuauuugaaaaguCCCCCAGGUGUGAUUCUGAUUCGUuuc
(((((..(((((((((.((.((((.((((.((....)).)))).)))).))...)))))))))..)))))

Structure
     UU         --U  A    U    a  a 
gaagc  AUCAGAAUC   CC GGGG ACuu uu u
|||||  |||||||||   || |||| |||| ||  
cuuUG  UAGUCUUAG   GG CCCC ugaa ag u
     CU         UGU  A    C    a  u 


Annotation confidence High
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Genome context
chrX: 84708911-84708980 [-]

Database links

Mature rno-miR-361-5p

Accession MIMAT0003117
Description Rattus norvegicus rno-miR-361-5p mature miRNA
Sequence 6 - UUAUCAGAAUCUCCAGGGGUAC - 27
Evidence experimental
SOLiD [2]

Mature rno-miR-361-3p

Accession MIMAT0017199
Description Rattus norvegicus rno-miR-361-3p mature miRNA
Sequence 44 - CCCCCAGGUGUGAUUCUGAUUCGU - 67
Evidence experimental
SOLiD [2]

References

  1. PubMed ID: 20403161
    Small RNA expression and strain specificity in the rat
    Linsen SE, de Wit E, de Bruijn E, Cuppen E
    BMC Genomics (2010) 11:249

  2. PubMed ID: 16274478
    Identification of clustered microRNAs using an ab initio prediction method
    Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M
    BMC Bioinformatics (2005) 6:267