Stem-loop fru-mir-133

Accession

MI0003397

Description

Fugu rubripes fru-mir-133 precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

aaugcuuugcuaaagcugguaaaauggaaccaaaucaccucuugaauggaUUUGGUCCCCUUCAACCAGCUGuagcuaugcuuugau
...((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))......

Structure

---aau  uuu    a       aa  u  a        accuc 
      gc   gcua agcuggu  aa gg accaaauc     u
      ||   |||| |||||||  || || ||||||||      
      cg   cgau UCGACCA  UU CC UGGUUUag     u
uaguuu  uau    G       AC  C  C        guaag 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602556.1: 1377140-1377226 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-133

Mature fru-miR-133

• Accession: MIMAT0003057
• Description: Fugu rubripes fru-miR-133 mature miRNA
• Sequence: 51 - UUUGGUCCCCUUCAACCAGCUG - 72
• Evidence: not_experimental

References