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miRBase |
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Stem-loop sequence dre-mir-212 |
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Accession | MI0003385 (change log) | |||||
Description | Danio rerio miR-212 stem-loop | |||||
Gene family | MIPF0000065; mir-132 | |||||
Literature search |
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5 open access papers mention dre-mir-212 | |||||
Stem-loop |
u a a - u c c c aa gug 5' gucag gc uca ua cc uggcu uagacug uuacug ua u u ||||| || ||| || || ||||| ||||||| |||||| || | 3' cgguc ug agu au gg acuga aucugac aaugac au a c - c c c u c - - ga agu |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This miRNA was predicted by computational methods using conservation between human, mouse and Fugu rubripes sequences [1]. Expression of the excised miR was validated in zebrafish, and the 5' end mapped by PCR. The 3' end was not experimentally determined. |
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence dre-miR-212 |
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Accession | MIMAT0003049 |
Sequence |
61 - uaacagucuacagucauggcu - 81 |
Deep sequencing | 37 reads, 10 experiments |
Evidence | experimental; PCR [1] |
Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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