Stem-loop sequence tni-mir-214

Accession

MI0003357 (change log)

Description

Tetraodon nigroviridis miR-214 stem-loop

Gene family

MIPF0000062; mir-214

Stem-loop

   ---------  g  g             aca            accu 
5'          gu gu ugucugccugucu   cuugcugugcag    u
            || || |||||||||||||   ||||||||||||    c
3'          cg ua acagacggacaga   ggacgacauguc    u
   ucaccccga  g  g             cac            cucg 

Confidence

Annotation confidence: not enough data

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Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

• Coordinates (Tetraodon8): 1: 12449346-12449433 [+]
• Overlapping transcripts:

  sense

  ENSTNIT00000023465 ; tni-mir-214-201; exon 1

Database links

• miRBase Tracker:MI0003357

Mature sequence tni-miR-214

• Accession: MIMAT0003027
• Sequence: 50 - acagcaggcacagacaggcag - 70
• Evidence: by similarity; MI0001381