miRBase entry: dre-let-7j

Stem-loop dre-let-7j


Accession
MI0003343
Description
Danio rerio dre-let-7j precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
39 open access papers mention dre-let-7j
(202 sentences)

Sequence

6328 reads, 522 reads per million, 11 experiments
gguUGAGGUAGUUGUUUGUACAGUUuuuagggucuguuauucugcccuguuaaggagcuaacuguacagacuacugccuugcc
(((.((((((((.((((((((((((..((((((..(.....).))))))..........)))))))))))).)))))))))))

Structure
   U        U            --------uu      cu u 
ggu GAGGUAGU GUUUGUACAGUU          uagggu  g u
||| |||||||| ||||||||||||          ||||||  | a
ccg uuccguca cagacaugucaa          gucccg  c u
   -        u            ucgaggaauu      -u u 


Annotation confidence High
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Comments
This zebrafish miRNA sequence is predicted based on homology with a verified mammalian sequence (Mihaela Zavolan, personal communication).

Genome context
chr6: 41454791-41454873 [+]

Database links

Mature dre-let-7j

Accession MIMAT0003015
Description Danio rerio dre-let-7j mature miRNA
Sequence 4 - UGAGGUAGUUGUUUGUACAGUU - 25
Evidence not_experimental
Database links
Predicted targets

References