miRBase entry: tni-mir-216a

Stem-loop tni-mir-216a


Accession
MI0003292
Description
Tetraodon nigroviridis tni-mir-216a precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

uuggugAAAUCUCAGCUGGCAACUGUGAgucguucacuagcugcucucacaauggccucugggauuaugcuaa
.(((((.((((((((..(((...((((((..((.........)).))))))...))).)))))))).))))).

Structure
u     A        CU   AAC      uc  uca 
 uggug AAUCUCAG  GGC   UGUGAg  gu   c
 ||||| ||||||||  |||   ||||||  ||   u
 aucgu uuaggguc  ccg   acacuc  cg   a
a     a        -u   gua      -u  ucg 


Annotation confidence Not enough data
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Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context
17: 5747758-5747830 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-216a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-216a

Accession MIMAT0002974
Description Tetraodon nigroviridis tni-miR-216a mature miRNA
Sequence 7 - AAAUCUCAGCUGGCAACUGUGA - 28
Evidence not_experimental

References