miRBase entry: hsa-mir-515-1

Stem-loop hsa-mir-515-1


Accession
MI0003144
Symbol
HGNC: MIR515-1
Description
Homo sapiens hsa-mir-515-1 precursor miRNA
Gene family
MIPF0000020; mir-515

Literature search
36 open access papers mention hsa-mir-515-1
(67 sentences)

Sequence

97 reads, 71 reads per million, 21 experiments
ucucaugcagucaUUCUCCAAAAGAAAGCACUUUCUGuugucugaaagcaGAGUGCCUUCUUUUGGAGCGUUacuguuugaga
(((((.(((((.((.(((((((((((.((((..((((((.......)))))))))).))))))))))).)).))))).)))))

Structure
     u     c  U           A    UU      gu 
ucuca gcagu aU CUCCAAAAGAA GCAC  UCUGuu  c
||||| ||||| || ||||||||||| ||||  ||||||  u
agagu uguca UG GAGGUUUUCUU CGUG  AGacga  g
     u     U  C           C    --      aa 


Annotation confidence Not enough data
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Comments
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context
chr19: 53679003-53679085 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from hsa-mir-515-1
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-515-1 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-515-5p

Accession MIMAT0002826
Description Homo sapiens hsa-miR-515-5p mature miRNA
Sequence 14 - UUCUCCAAAAGAAAGCACUUUCUG - 37
Evidence experimental
array-cloned [1], cloned [2]
Database links
Predicted targets

Mature hsa-miR-515-3p

Accession MIMAT0002827
Description Homo sapiens hsa-miR-515-3p mature miRNA
Sequence 51 - GAGUGCCUUCUUUUGGAGCGUU - 72
Evidence experimental
array-cloned [1], cloned [2]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770