Stem-loop lca-mir-19b-2

Accession

MI0003105

Description

Lemur catta lca-mir-19b-2 precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

auacugcuacucacgauuaguuuugcagguuugcauuucagcguauacauaaggcUGUGCAAAUCCAUGCAAAACUGAucgugauaaugu
..........(((((((((((((((((((((((((...((((.(.......).)))))))))).)).)))))))))))))))))......

Structure

auacugcuac                 -  -      uuu    g au 
          ucacgauuaguuuugca gg uuugca   cagc u  a
          ||||||||||||||||| || ||||||   |||| |  c
          agugcuAGUCAAAACGU CC AAACGU   GUcg a  a
----uguaau                 A  U      ---    g au 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lca-miR-19b

• Accession: MIMAT0002670
• Description: Lemur catta lca-miR-19b mature miRNA
• Sequence: 56 - UGUGCAAAUCCAUGCAAAACUGA - 78
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24