Stem-loop lla-mir-93

Accession

MI0003079

Description

Lagothrix lagotricha lla-mir-93 precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

cucggggcuccAAAGUGCUGUUCGUGCAGGUAGugugauuaccugaccuacugcugagcuagcacuucccgagcccccgg
...(((((((..((((((((((((.((((.(((.((.(.....).)))))))))))))).)))))))...)))))))...

Structure

cuc       -cA       -     U    G   u  g u 
   ggggcuc   AAGUGCU GUUCG GCAG UAG gu a u
   |||||||   ||||||| ||||| |||| ||| || | a
   ccccgag   uucacga cgagu cguc auc ca u c
ggc       ccc       u     -    -   -  g c 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-93

• Accession: MIMAT0002778
• Description: Lagothrix lagotricha lla-miR-93 mature miRNA
• Sequence: 12 - AAAGUGCUGUUCGUGCAGGUAG - 33
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24