miRBase entry: sla-mir-27a

Stem-loop sla-mir-27a


Accession
MI0003055
Description
Saguinus labiatus sla-mir-27a precursor miRNA
Gene family
MIPF0000036; mir-27


Sequence

cugaggagcagggcuuagcugcuugugagcaggguucacuccaagucaugUUCACAGUGGCUAAGUUCCGCCccccag
(((.((.((.(((((((((((((.(((((((((.((......)).)).)))))))))))))))))))).)).)).)))

Structure
   a  a  a             u       -  g  ca 
cug gg gc gggcuuagcugcu gugagca gg uu  c
||| || || ||||||||||||| ||||||| || ||   
gac cc CG CUUGAAUCGGUGA CACUUgu cu aa  u
   c  C  C             -       a  g  cc 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-27a

Accession MIMAT0002755
Description Saguinus labiatus sla-miR-27a mature miRNA
Sequence 51 - UUCACAGUGGCUAAGUUCCGCC - 72
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24