miRBase entry: sla-mir-23a

Stem-loop sla-mir-23a


Accession
MI0003054
Description
Saguinus labiatus sla-mir-23a precursor miRNA
Gene family
MIPF0000027; mir-23


Sequence

ggccggcugggguuccuggggaugggauuugcugccuaucacaaAUCACAUUGCCAGGGAUUUCCaaccgacc
((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).))

Structure
  c   c     -       g    g      c  c 
gg cgg ugggg uuccugg gaug gauuug ug c
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc aCCUU AGGGACC UUAC CUAaac ac a
  a   a     U       G    A      -  u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-23a

Accession MIMAT0002754
Description Saguinus labiatus sla-miR-23a mature miRNA
Sequence 45 - AUCACAUUGCCAGGGAUUUCC - 65
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24