Stem-loop mne-mir-215

Accession

MI0003033

Description

Macaca nemestrina mne-mir-215 precursor miRNA

Gene family

MIPF0000063; mir-192

Sequence

aucauuaagaaaugguauacaggaaaAUGACCUAUGAAUUGACAGACacuauagcugaguuugucugucauuucuuuaggccaauauucuguaugacugugcuacuucaa
.......((..(((((((((((((...((.((((.(((.(((((((((..((......)).))))))))).)))..)))).))...)))))))).))))).)).......

Structure

aucauua  aa     -        aaA  A    -U   U         cu  ag 
       ag  auggu auacagga   UG CCUA  GAA UGACAGACa  au  c
       ||  ||||| ||||||||   || ||||  ||| |||||||||  ||   
       uc  uguca uaugucuu   ac ggau  cuu acugucugu  ug  u
aacuuca  -g     g        aua  c    uu   u         -u  ag 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature mne-miR-215

• Accession: MIMAT0002736
• Description: Macaca nemestrina mne-miR-215 mature miRNA
• Sequence: 27 - AUGACCUAUGAAUUGACAGAC - 47
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24