miRBase entry: mml-mir-92a-1

Stem-loop mml-mir-92a-1


Accession
MI0003006
Description
Macaca mulatta mml-mir-92a-1 precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
2 open access papers mention mml-mir-92a-1
(8 sentences)

Sequence

99662 reads, 1056 reads per million, 9 experiments
cuuucuacacagguugggaucgguugcaaugcuguguuucuguauggUAUUGCACUUGUCCCGGCCUGUugaguuugg
....((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..)).....

Structure
-cuuu  ac            c   u           uu 
     cu  acagguugggau ggu gcaaugcugug  u
     ||  |||||||||||| ||| |||||||||||   
     ga  UGUCCGGCCCUG UCA CGUUAUgguau  c
gguuu  gu            U   -           gu 


Annotation confidence High
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1].

Genome context
chr17: 73096816-73096893 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-92a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-92a-3p

Accession MIMAT0002706
Description Macaca mulatta mml-miR-92a-3p mature miRNA
Sequence 48 - UAUUGCACUUGUCCCGGCCUGU - 69
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 15345052
    Microarray analysis of microRNA expression in the developing mammalian brain
    Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P, Constantine-Paton M, Horvitz HR
    Genome Biol (2004) 5:R68

  2. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24