miRBase entry: ggo-mir-181a-2

Stem-loop ggo-mir-181a-2


Accession
MI0002805
Description
Gorilla gorilla ggo-mir-181a-2 precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
1 open access papers mention ggo-mir-181a-2
(9 sentences)

Sequence

agaagggcuaucaggccaggcuucagaggacuccaaggAACAUUCAACGCUGUCGGUGAGUuugggauuugaaaaaaccacugaccguugacuguaccuugggguccuua
.((((((((....))))...)))).(((((((((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))))))))))).

Structure
agaagggcuaucaggccaggcuuca             A   U      CU       A    ggga 
                         gaggacuccaagg ACA UCAACG  GUCGGUG GUuu    u
                         ||||||||||||| ||| ||||||  ||||||| ||||    u
                         uuccugggguucc ugu aguugc  cagucac caaa    u
------------------------a             a   c      --       -    aaag 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr9: 108102155-108102264 [+]

Database links

Mature ggo-miR-181a-5p

Accession MIMAT0002503
Description Gorilla gorilla ggo-miR-181a-5p mature miRNA
Sequence 39 - AACAUUCAACGCUGUCGGUGAGU - 61
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24