miRBase entry: ggo-mir-7-3

Stem-loop ggo-mir-7-3


Accession
MI0002786
Description
Gorilla gorilla ggo-mir-7-3 precursor miRNA
Gene family
MIPF0000022; mir-7

Literature search
1 open access papers mention ggo-mir-7-3
(8 sentences)

Sequence

agauuggaguggcuguggucuagugcugugUGGAAGACUAGUGAUUUUGUUguucugauguacuacgacaacaagucacagccggccucacagcgcagacucccuucgac
...((((((.((....(((((.((((((((.((..(.((.(((((((.((((((.((......)).))))))))))))))).)..)).))))))))))))))))))))).

Structure
aga      u  cugu     a        U  AA A  A       U      c  au 
   uuggag gg    ggucu gugcugug GG  G CU GUGAUUU GUUguu ug  g
   |||||| ||    ||||| |||||||| ||  | || ||||||| |||||| ||   
   agcuuc cc    ucaga cgcgacac cc  c ga cacugaa caacag au  u
--c      -  ----     -        u  gg c  -       -      c  ca 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr19: 4515836-4515945 [+]

Database links

Mature ggo-miR-7

Accession MIMAT0002479
Description Gorilla gorilla ggo-miR-7 mature miRNA
Sequence 31 - UGGAAGACUAGUGAUUUUGUU - 51
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24