Stem-loop ggo-mir-7-2

Accession

MI0002781

Description

Gorilla gorilla ggo-mir-7-2 precursor miRNA

Gene family

MIPF0000022; mir-7

Literature search

1 open access papers mention ggo-mir-7-2
(8 sentences)

Sequence

cugcauacagaguggaccggcuggccccaucUGGAAGACUAGUGAUUUUGUUguugucuuacugcgcucaacaacaaaucccagucugccuaauggugccagccaucgca
(((....))).((((...(((((((.((((..((.(((((.(.(((((.(((((((............))))))))))))).))))).))..)))).))))))).)))).

Structure

cugcauacaga    acc       c    cU  A     A U     U       ucuua 
           gugg   ggcuggc ccau  GG AGACU G GAUUU GUUguug     c
           ||||   ||||||| ||||  || ||||| | ||||| |||||||      
           cgcu   ccgaccg ggua  cc ucuga c cuaaa caacaac     u
----------a    --a       u    au  g     c -     -       ucgcg 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr15: 67211255-67211364 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-7-2

Mature ggo-miR-7

• Accession: MIMAT0002479
• Description: Gorilla gorilla ggo-miR-7 mature miRNA
• Sequence: 32 - UGGAAGACUAGUGAUUUUGUU - 52
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24