miRBase entry: lla-mir-7

Stem-loop lla-mir-7


Accession
MI0002778
Description
Lagothrix lagotricha lla-mir-7 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

uuggauguuggccuaguucugugUGGAAGACUAGUGAUUUUGUUguuuuuagauaacuaaaucgacaacaaaucacagucugccauauggcacaggccaugccucuacag
.((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).)).))))...

Structure
--u    u  -      a  u        A     A       U      --     a 
   ugga gu uggccu gu cugugUGG AGACU GUGAUUU GUUguu  uuuag u
   |||| || |||||| || |||||||| ||||| ||||||| ||||||  |||||  
   aucu cg accgga ca gguauacc ucuga cacuaaa caacag  aaauc a
gac    c  u      -  c        g     -       -      cu     a 


Annotation confidence Not enough data
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lla-miR-7

Accession MIMAT0002482
Description Lagothrix lagotricha lla-miR-7 mature miRNA
Sequence 24 - UGGAAGACUAGUGAUUUUGUU - 44
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24