Stem-loop sla-mir-7

Accession

MI0002777

Description

Saguinus labiatus sla-mir-7 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

uuggauauuggccuaguucugugUGGAAGACUAGUGAUUUUGUUguuuuuagauaauuaaaucgacaacaaaucacagucugccauauggcacaggccaugccucuacag
.((((...((((((.((.((((((((.(((((.(((((((.((((((....(((......))))))))))))))))))))).)))))))).))))))))....))))...

Structure

--u    -uau      a  u        A     A       U      uuua   aa 
   ugga    uggccu gu cugugUGG AGACU GUGAUUU GUUguu    gau  u
   ||||    |||||| || |||||||| ||||| ||||||| ||||||    |||   
   aucu    accgga ca gguauacc ucuga cacuaaa caacag    cua  u
gac    ccgu      -  c        g     -       -      ----   aa 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-7

• Accession: MIMAT0002481
• Description: Saguinus labiatus sla-miR-7 mature miRNA
• Sequence: 24 - UGGAAGACUAGUGAUUUUGUU - 44
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24