Stem-loop ppa-mir-147

Accession

MI0002774

Description

Pan paniscus ppa-mir-147 precursor miRNA

Gene family

MIPF0000105; mir-147

Sequence

aaucuaaagaaaacauuucugcacacacaccagacuauggaagccaGUGUGUGGAAAUGCUUCUGCuagauu
((((((.((((..(((((((((((((...(((.....)))......))))))))))))).))))..))))))

Structure

      -a    aa             ---aca   g 
aaucua  agaa  cauuucugcacac      cca a
||||||  ||||  |||||||||||||      ||| c
uuagau  UCUU  GUAAAGGUGUGUG      ggu u
      CG    -C             accgaa   a 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr9: 119718166-119718237 [-]

Mature ppa-miR-147

• Accession: MIMAT0002478
• Description: Pan paniscus ppa-miR-147 mature miRNA
• Sequence: 47 - GUGUGUGGAAAUGCUUCUGC - 66
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24