miRBase entry: lla-mir-139

Stem-loop lla-mir-139


Accession
MI0002768
Description
Lagothrix lagotricha lla-mir-139 precursor miRNA
Gene family
MIPF0000117; mir-139


Sequence

guguauUCUACAGUGCACGUGUCUccaguguggcucggaggcuggagacgcggcccuguuggaguaac
...((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))))..

Structure
gug       -   U  A            g gg 
   uauUCUA CAG GC CGUGUCUccagu u  c
   ||||||| ||| || |||||||||||| |  u
   augaggu guc cg gcgcagaggucg a  c
-ca       u   c  -            g gg 


Annotation confidence Not enough data
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lla-miR-139

Accession MIMAT0002472
Description Lagothrix lagotricha lla-miR-139 mature miRNA
Sequence 7 - UCUACAGUGCACGUGUCU - 24
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24