miRBase entry: mml-mir-33a

Stem-loop mml-mir-33a


Accession
MI0002684
Description
Macaca mulatta mml-mir-33a precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

10764 reads, 71 reads per million, 9 experiments
cugcgGUGCAUUGUAGUUGCAUUGcauguucuggugguacccaugcaauguuuccacagugcauuacag
(((.((((((((((.(..((((((((((....(((...)))))))))))))..).)))))))))).)))

Structure
   c          A UU          uucu   g 
cug gGUGCAUUGU G  GCAUUGcaug    ggu  
||| |||||||||| |  ||||||||||    ||| g
gac uuacgugaca c  uguaacguac    cca  
   a          c uu          ----   u 


Annotation confidence High
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1].

Genome context
chr10: 83990729-83990797 [+]

Database links

Mature mml-miR-33a

Accession MIMAT0002392
Description Macaca mulatta mml-miR-33a mature miRNA
Sequence 6 - GUGCAUUGUAGUUGCAUUG - 24
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15345052
    Microarray analysis of microRNA expression in the developing mammalian brain
    Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P, Constantine-Paton M, Horvitz HR
    Genome Biol (2004) 5:R68

  2. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24