miRBase entry: ppy-mir-32

Stem-loop ppy-mir-32


Accession
MI0002680
Description
Pongo pygmaeus ppy-mir-32 precursor miRNA
Gene family
MIPF0000069; mir-32


Sequence

ggagaUAUUGCACAUUACUAAGUUGCauguugucacggccucaaugcaauuuagugugugugauauuuuc
(((((((((((((((.(((((((((((((..((....))..).)))))))))))))))))))))))))))

Structure
               U            - uu  c 
ggagaUAUUGCACAU ACUAAGUUGCau g  gu a
||||||||||||||| |||||||||||| |  ||  
cuuuuauagugugug ugauuuaacgua c  cg c
               -            a uc  g 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr9: 105405856-105405925 [-]

Database links

Mature ppy-miR-32

Accession MIMAT0002388
Description Pongo pygmaeus ppy-miR-32 mature miRNA
Sequence 6 - UAUUGCACAUUACUAAGUUGC - 26
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24