miRBase entry: mml-mir-30a

Stem-loop mml-mir-30a


Accession
MI0002666
Description
Macaca mulatta mml-mir-30a precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
4 open access papers mention mml-mir-30a
(9 sentences)

Sequence

6933839 reads, 48019 reads per million, 9 experiments
gcgacUGUAAACAUCCUCGACUGGAAGcugugaagccauagaugggCUUUCAGUCGGAUGUUUGCAGCugc
(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).)))

Structure
   a            UC           -----   a 
gcg cUGUAAACAUCC  GACUGGAAGcu     gug a
||| ||||||||||||  |||||||||||     |||  
cgu GACGUUUGUAGG  CUGACUUUCgg     uac g
   C            --           guaga   c 


Annotation confidence High
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr4: 69466191-69466261 [-]

Database links

Mature mml-miR-30a-5p

Accession MIMAT0002369
Description Macaca mulatta mml-miR-30a-5p mature miRNA
Sequence 6 - UGUAAACAUCCUCGACUGGAAG - 27
Evidence not_experimental
Database links
Predicted targets

Mature mml-miR-30a-3p

Accession MIMAT0002370
Description Macaca mulatta mml-miR-30a-3p mature miRNA
Sequence 47 - CUUUCAGUCGGAUGUUUGCAGC - 68
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24