Stem-loop ppa-mir-195

Accession

MI0002618

Description

Pan paniscus ppa-mir-195 precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

agcuucccuggcucUAGCAGCACAGAAAUAUUGGCacagggaagcgagucugccaauauuggcugugcugcuccaggcaggguggug
.(((.(((((.((..((((((((((.((((((((((..((........))))))))))))..))))))))))..)).))))).))).

Structure

a   u     g  cU          -A          ca  gaa 
 gcu cccug cu  AGCAGCACAG  AAUAUUGGCa  gg   g
 ||| ||||| ||  ||||||||||  ||||||||||  ||    
 ugg gggac ga  ucgucguguc  uuauaaccgu  cu   c
g   u     g  cc          gg          --  gag 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr17: 7036725-7036811 [-]

Mature ppa-miR-195

• Accession: MIMAT0002317
• Description: Pan paniscus ppa-miR-195 mature miRNA
• Sequence: 15 - UAGCAGCACAGAAAUAUUGGC - 35
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24