miRBase entry: mml-mir-190a

Stem-loop mml-mir-190a


Accession
MI0002613
Description
Macaca mulatta mml-mir-190a precursor miRNA
Gene family
MIPF0000076; mir-190


Sequence

14538 reads, 100 reads per million, 9 experiments
ugcaggccucugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaaCUAUAUAUCAAACAUAUUCCUacagugucuugcc
.(((((.(.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).).))))).

Structure
u     c u     -U                UA     uuau 
 gcagg c cugug  GAUAUGUUUGAUAUAU  GGUug    u
 ||||| | |||||  ||||||||||||||||  |||||     
 cguuc g gacaU  UUAUACAAACUAUAUA  UCaac    u
c     u u     CC                --     cuaa 


Annotation confidence High
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr7: 39416819-39416903 [+]

Database links

Mature mml-miR-190a-5p

Accession MIMAT0002312
Description Macaca mulatta mml-miR-190a-5p mature miRNA
Sequence 15 - UGAUAUGUUUGAUAUAUUAGGU - 36
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-190a-3p

Accession MIMAT0026572
Description Macaca mulatta mml-miR-190a-3p mature miRNA
Sequence 52 - CUAUAUAUCAAACAUAUUCCU - 72
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45