miRBase entry: sla-mir-127

Stem-loop sla-mir-127


Accession
MI0002585
Description
Saguinus labiatus sla-mir-127 precursor miRNA
Gene family
MIPF0000080; mir-127


Sequence

ugugaucacugucuccagccugcugaagcucagagggcucugauucagaaagaucaUCGGAUCCGUCUGAGCUUGGCUggucggaagucucaucauc
.(((((.(((...(((.(((.(((.(((((((((.((.((((((((.....))..)))))).)).)))))))))))).))).))))))...))))).

Structure
u     --c   guc   a   u   g         g  c      --  a 
 gugau   acu   ucc gcc gcu aagcucaga gg ucugau  uc g
 |||||   |||   ||| ||| ||| ||||||||| || ||||||  || a
 uacua   uga   agg ugg CGG UUCGAGUCU CC AGGCUa  ag a
c     cuc   ---   c   U   -         G  U      cu  a 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-127

Accession MIMAT0002284
Description Saguinus labiatus sla-miR-127 mature miRNA
Sequence 57 - UCGGAUCCGUCUGAGCUUGGCU - 78
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24