miRBase entry: lca-mir-125b

Stem-loop lca-mir-125b


Accession
MI0002576
Description
Lemur catta lca-mir-125b precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

accagacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguauuuuaguaacaucacaagucaggcucuugggaccuaggcggagggga
.((...((((.(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).)))).)).

Structure
a  aga    u     -    U    C   A        g  auu 
 cc   cuuu ccuag UCCC GAGA CCU ACUUGUGA gu   u
 ||   |||| ||||| |||| |||| ||| |||||||| ||   u
 gg   gagg ggauc aggg uucu gga ugaacacu ca   a
a  --g    c     c    -    c   c        a  aug 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lca-miR-125b

Accession MIMAT0002280
Description Lemur catta lca-miR-125b mature miRNA
Sequence 17 - UCCCUGAGACCCUAACUUGUGA - 38
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24