Stem-loop mne-mir-140

Accession

MI0002548

Description

Macaca nemestrina mne-mir-140 precursor miRNA

Gene family

MIPF0000085; mir-140

Sequence

ugugucucucucuguguccugccAGUGGUUCUACCCUAUGGUAGguuacgucaugcuguucuaccacaggguagaaccacggacaggauaccggggcacc
.(((((((.....((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).)))))))).))))))).

Structure

u       ucucu        -  A             A       u  c  c 
 gugucuc     guguccug cc GUGGUUCUACCCU UGGUAGg ua gu  
 |||||||     |||||||| || ||||||||||||| ||||||| || || a
 cacgggg     cauaggac gg caccaagauggga accaucu gu cg  
c       ----c        a  -             c       u  -  u 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature mne-miR-140

• Accession: MIMAT0002256
• Description: Macaca nemestrina mne-miR-140 mature miRNA
• Sequence: 24 - AGUGGUUCUACCCUAUGGUAG - 44
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24