miRBase entry: lla-mir-135-2

Stem-loop lla-mir-135-2


Accession
MI0002544
Description
Lagothrix lagotricha lla-mir-135-2 precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

agauaaauucacucuagugcuuUAUGGCUUUUUAUUCCUAUGUGAuaguaauaaagucucauguagggauggaagccaugcaccacauaauguaaaauca
................((((...(((((((((.((((((((((((.(.(.....).).))))))))))))))))))))))))).................

Structure
-agauaaauucacucua    uuU         U            u g a 
                 gugc   AUGGCUUUU AUUCCUAUGUGA a u a
                 ||||   ||||||||| |||||||||||| | | u
                 cacg   uaccgaagg uagggauguacu u a a
acuaaaauguaauacac    ---         -            c g a 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lla-miR-135

Accession MIMAT0002248
Description Lagothrix lagotricha lla-miR-135 mature miRNA
Sequence 23 - UAUGGCUUUUUAUUCCUAUGUGA - 45
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24